STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Maeo_0393PFAM: glycosyl transferase family 9; KEGG: plu:plu4853 lipopolysaccharide core biosynthesis glycosyl transferase RfaQ. (385 aa)    
Predicted Functional Partners:
Maeo_0396
PFAM: glycosyl transferase family 2; KEGG: pab:PAB1981 dolichol-phosphate mannose synthase.
 
     0.801
Maeo_0392
KEGG: mac:MA1054 hypothetical protein.
       0.773
Maeo_0394
PFAM: glycosyl transferase group 1; KEGG: mhu:Mhun_2129 glycosyl transferase, group 1.
       0.773
Maeo_0395
PFAM: glycosyl transferase group 1; KEGG: sru:SRU_2402 glycosyl transferase.
       0.773
Maeo_0400
PFAM: PfkB domain protein; KEGG: aae:aq_565 ADP-heptose synthase.
 
     0.757
Maeo_0401
rfaE bifunctional protein; TIGRFAM: cytidyltransferase-related domain; rfaE bifunctional protein; PFAM: cytidylyltransferase; KEGG: fnu:FN0930 glycerol-3-phosphate cytidylyltransferase.
 
     0.694
Maeo_0398
TIGRFAM: ADP-L-glycero-D-manno-heptose-6-epimerase; PFAM: NAD-dependent epimerase/dehydratase; 3-beta hydroxysteroid dehydrogenase/isomerase; dTDP-4-dehydrorhamnose reductase; Male sterility domain; KEGG: aae:aq_344 ADP-L-glycero-D-manno-heptose-6-epimerase.
 
     0.568
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
       0.535
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.
 
     0.492
Maeo_0399
TIGRFAM: histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; KEGG: fnu:FN1461 UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate--D-alanyl- D-alanine ligase.
 
     0.457
Your Current Organism:
Methanococcus aeolicus
NCBI taxonomy Id: 419665
Other names: M. aeolicus Nankai-3, Methanococcus aeolicus Nankai-3, Methanococcus aeolicus str. Nankai-3, Methanococcus aeolicus strain Nankai-3
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