STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEQ47155.1Putative MetA-pathway of phenol degradation. (341 aa)    
Predicted Functional Partners:
SEQ47186.1
Hypothetical protein.
       0.772
SEQ94335.1
Hypothetical protein.
  
     0.772
SEP73923.1
Hypothetical protein.
  
     0.771
SEP85608.1
Hypothetical protein.
  
     0.771
SEP95279.1
Protein of unknown function.
  
     0.771
SEP81590.1
Hypothetical protein.
  
     0.768
SEQ38822.1
dTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose.
  
     0.764
SEQ07188.1
Hypothetical protein.
  
     0.761
SEQ47885.1
Hypothetical protein.
  
     0.761
SEP81629.1
Hypothetical protein.
  
     0.758
Your Current Organism:
Hyunsoonleella jejuensis
NCBI taxonomy Id: 419940
Other names: DSM 21035, Flavobacteriaceae bacterium CNU004, H. jejuensis, Hyunsoonleella jejuensis Yoon et al. 2010 emend. Park et al. 2013, KCTC 22242, strain CNU004
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.