STRINGSTRING
Msm_0721 protein (Methanobrevibacter smithii) - STRING interaction network
"Msm_0721" - Adenylate cyclase, class 2 in Methanobrevibacter smithii
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Msm_0721Adenylate cyclase, class 2 (179 aa)    
Predicted Functional Partners:
Msm_1376
DNA-directed RNA polymerase subunit F (114 aa)
   
   
    0.932
rpoL
DNA-directed RNA polymerase, subunit L, RpoL; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (96 aa)
   
 
    0.915
Msm_0911
DNA-directed RNA polymerase subunit beta’’ (514 aa)
   
   
    0.912
rpoH
DNA-directed RNA polymerase subunit H; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (77 aa)
     
 
    0.905
Msm_0197
DNA-directed RNA polymerase subunit E’ (185 aa)
     
 
    0.902
Msm_1631
DNA-directed RNA polymerase II, subunit RPC10 (43 aa)
         
    0.900
rpoK
DNA-directed RNA polymerase, subunit K, RpoK; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (65 aa)
         
    0.900
Msm_1432
DNA-directed RNA polymerase subunit N (56 aa)
         
    0.900
rpoD
DNA-directed RNA polymerase subunit D; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (274 aa)
         
    0.900
Msm_1383
Anaerobic ribonucleoside-triphosphate reductase, NrdD (776 aa)
         
    0.900
Your Current Organism:
Methanobrevibacter smithii
NCBI taxonomy Id: 420247
Other names: M. smithii, M. smithii ATCC 35061, Methanobrevibacter smithii, Methanobrevibacter smithii ATCC 35061, Methanobrevibacter smithii DSM 861, Methanobrevibacter smithii PS, Methanobrevibacter smithii str. ATCC 35061, Methanobrevibacter smithii strain ATCC 35061
Server load: low (13%) [HD]