STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mpe_A1100Conserved hypothetical protein. (262 aa)    
Predicted Functional Partners:
Mpe_A0900
3-hydroxyacyl-CoA dehydrogenase.
 0.975
Mpe_A0880
3-hydroxyacyl-CoA dehydrogenase.
 0.973
Mpe_A3360
isovaleryl-CoA dehydrogenase.
 
 0.963
Mpe_A3170
glutaryl-CoA dehydrogenase.
 
 0.958
Mpe_A0893
Enoyl-CoA hydratase.
 
 
0.950
Mpe_A0984
Short chain enoyl-CoA hydratase / Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 
0.950
Mpe_A1953
Putative acyl-CoA dehydrogenase family protein.
  
 0.943
Mpe_A3678
Putative enoyl-CoA hydratase/isomerase.
  
  
 
0.928
Mpe_A1775
3-hydroxyacyl-CoA dehydrogenase / short chain enoyl-CoA hydratase.
0.927
Mpe_A3356
3-methylcrotonoyl-CoA carboxylase, alpha subunit.
  
 0.926
Your Current Organism:
Methylibium petroleiphilum
NCBI taxonomy Id: 420662
Other names: M. petroleiphilum PM1, MTBE-degrading bacterium PM1, Methylibium petroleiphilum PM1, Methylibium petroleiphilum str. PM1, Methylibium petroleiphilum strain PM1, Rubrivivax gelatinosus PM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.