STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
narK-2NO3-/NO2- ABC transporter. (305 aa)    
Predicted Functional Partners:
narK
NO3-/NO2- ABC transporter.
 
 0.996
narK-3
NO3-/NO2- ABC transporter.
 
 
 0.996
Mpe_A3485
Putative nitrate transport system ATP-binding protein.
 
 0.986
Mpe_A3487
Putative nitrate transporter component, nrtA.
 
 
 0.985
Mpe_A3486
Nitrate ABC transporter permease protein.
  
  
 
0.908
Mpe_A1705
Respiratory nitrate reductase gamma subunit.
     
  0.900
Mpe_A1707
Respiratory nitrate reductase beta subunit.
     
  0.900
Mpe_A1708
Respiratory nitrate reductase alpha subunit apoprotein; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
     
  0.900
Mpe_A0925
ABC transporter ATP-binding protein.
  
 0.825
Mpe_A0927
ABC-type nitrate/sulfonate/bicarbonate transport system ATPase component-like protein.
  
 0.824
Your Current Organism:
Methylibium petroleiphilum
NCBI taxonomy Id: 420662
Other names: M. petroleiphilum PM1, MTBE-degrading bacterium PM1, Methylibium petroleiphilum PM1, Methylibium petroleiphilum str. PM1, Methylibium petroleiphilum strain PM1, Rubrivivax gelatinosus PM1
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