Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
Mpe_A0067 | Mpe_A1493 | Conserved hypothetical protein. | Putative protein kinase. | 0.630 |
Mpe_A0067 | Mpe_A2126 | Conserved hypothetical protein. | Dihydrolipoamide dehydrogenase. | 0.510 |
Mpe_A0067 | Mpe_A2316 | Conserved hypothetical protein. | Putative serine/threonine protein kinase. | 0.754 |
Mpe_A0067 | Mpe_A2492 | Conserved hypothetical protein. | Adenylate cyclase family 3-like protein; Some proteins contain HAMP domain. | 0.432 |
Mpe_A0067 | Mpe_A2971 | Conserved hypothetical protein. | Serine/threonine protein kinase-like protein. | 0.754 |
Mpe_A1185 | Mpe_A2316 | Hypothetical protein. | Putative serine/threonine protein kinase. | 0.697 |
Mpe_A1185 | Mpe_A2492 | Hypothetical protein. | Adenylate cyclase family 3-like protein; Some proteins contain HAMP domain. | 0.660 |
Mpe_A1493 | Mpe_A0067 | Putative protein kinase. | Conserved hypothetical protein. | 0.630 |
Mpe_A1493 | Mpe_A2316 | Putative protein kinase. | Putative serine/threonine protein kinase. | 0.768 |
Mpe_A1493 | Mpe_A2492 | Putative protein kinase. | Adenylate cyclase family 3-like protein; Some proteins contain HAMP domain. | 0.504 |
Mpe_A1493 | Mpe_A2971 | Putative protein kinase. | Serine/threonine protein kinase-like protein. | 0.712 |
Mpe_A2126 | Mpe_A0067 | Dihydrolipoamide dehydrogenase. | Conserved hypothetical protein. | 0.510 |
Mpe_A2126 | Mpe_A2316 | Dihydrolipoamide dehydrogenase. | Putative serine/threonine protein kinase. | 0.810 |
Mpe_A2126 | Mpe_A2492 | Dihydrolipoamide dehydrogenase. | Adenylate cyclase family 3-like protein; Some proteins contain HAMP domain. | 0.520 |
Mpe_A2126 | Mpe_A2809 | Dihydrolipoamide dehydrogenase. | Putative sensor protein. | 0.470 |
Mpe_A2316 | Mpe_A0067 | Putative serine/threonine protein kinase. | Conserved hypothetical protein. | 0.754 |
Mpe_A2316 | Mpe_A1185 | Putative serine/threonine protein kinase. | Hypothetical protein. | 0.697 |
Mpe_A2316 | Mpe_A1493 | Putative serine/threonine protein kinase. | Putative protein kinase. | 0.768 |
Mpe_A2316 | Mpe_A2126 | Putative serine/threonine protein kinase. | Dihydrolipoamide dehydrogenase. | 0.810 |
Mpe_A2316 | Mpe_A2317 | Putative serine/threonine protein kinase. | Assimilatory nitrite reductase (NAD(P)H) large subunit precursor; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. | 0.634 |
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