STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0006158Mitochondrial import inner membrane translocase subunit tim16. (65 aa)    
Predicted Functional Partners:
BK809_0007169
Mitochondrial import inner membrane translocase subunit tim14.
   
 0.986
BK809_0004878
Mitochondrial import inner membrane translocase subunit TIM23; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.976
BK809_0003184
Mitochondrial import inner membrane translocase subunit tim44.
   
 0.974
BK809_0003834
Mitochondrial import inner membrane translocase subunit tim-17.
   
 0.962
BK809_0003685
Mitochondrial import inner membrane translocase subunit TIM50; Essential component of the TIM23 complex, a complex that mediates the translocation of transit peptide-containing proteins across the mitochondrial inner membrane.
   
 0.926
BK809_0002356
Presequence translocated-associated motor subunit pam17, mitochondrial.
    
 0.870
BK809_0007286
Mitochondrial import inner membrane translocase subunit tim21.
    
 0.870
BK809_0001774
GrpE protein-like protein, mitochondrial; Belongs to the GrpE family.
   
 0.855
BK809_0005535
Heat shock 70 kDa protein; Belongs to the heat shock protein 70 family.
    
 0.802
BK809_0005142
Mitochondrial-processing peptidase subunit alpha.
   
 0.713
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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