STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BK809_0007765Chitin synthase A. (1131 aa)    
Predicted Functional Partners:
BK809_0006925
UDP-N-acetylglucosamine pyrophosphorylase.
   
 
 0.909
BK809_0007441
Chitin synthase 4.
    
0.683
BK809_0006977
Acetolactate synthase.
  
 
 0.612
BK809_0004367
UBA domain-containing protein 7.
  
 0.603
BK809_0006398
Chitin synthase D.
    
0.586
BK809_0006435
Uncharacterized protein.
  
 0.579
BK809_0006503
Putative alpha-N-arabinofuranosidase A.
  
 0.579
BK809_0001171
Putative alpha-N-arabinofuranosidase A.
  
 0.579
BK809_0000034
Uncharacterized protein.
  
 0.579
BK809_0005192
Kinesin light chain.
  
 0.579
Your Current Organism:
Diplodia seriata
NCBI taxonomy Id: 420778
Other names: Botryosphaeria obtusa, CBS 112555, D. seriata
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.