STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000429865_01862Unannotated protein. (713 aa)    
Predicted Functional Partners:
GCA_000429865_01861
Unannotated protein.
 
  
 0.996
GCA_000429865_01863
Unannotated protein.
  
 
 0.973
GCA_000429865_02677
Unannotated protein.
    
 0.935
GCA_000429865_03093
Unannotated protein.
    
 0.934
GCA_000429865_03089
Unannotated protein.
  
 
 0.933
GCA_000429865_02100
Unannotated protein.
    
 0.931
GCA_000429865_02679
Unannotated protein.
    
 0.928
GCA_000429865_01865
Unannotated protein.
 
   
 0.917
GCA_000429865_03422
Unannotated protein.
    
 0.916
GCA_000429865_03088
Unannotated protein.
    
 0.908
Your Current Organism:
Cucumibacter marinus
NCBI taxonomy Id: 422296
Other names: C. marinus DSM 18995, Cucumibacter marinus CL-GR60, Cucumibacter marinus DSM 18995, Rhizobiales bacterium CL-GR60
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.