STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZE51DUF1729 domain-containing protein. (66 aa)    
Predicted Functional Partners:
A0A2T7A4R1
ANTH domain-domain-containing protein.
    
 0.565
A0A2T7A6N4
JAB1/Mov34/MPN/PAD-1 ubiquitin protease-domain-containing protein.
    
  0.537
A0A2T6ZVM2
Metalloenzyme, LuxS/M16 peptidase-like protein; Belongs to the peptidase M16 family.
    
 0.531
A0A2T6ZYQ3
NLPC_P60 domain-containing protein.
    
  0.515
A0A2T6ZZT7
Metalloenzyme, LuxS/M16 peptidase-like protein.
    
 0.510
A0A2T6ZR28
t-SNARE.
    
  0.508
A0A2T6ZVN3
t-SNARE.
    
  0.508
A0A2T6ZDF4
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
    
  0.506
A0A2T6ZCR9
P-loop containing nucleoside triphosphate hydrolase protein; Belongs to the AAA ATPase family.
    
  0.505
A0A2T6ZBQ6
Ankyrin repeat-containing domain protein.
    
  0.502
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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