STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T6ZTZ1Actin cortical patch SUR7/pH-response regulator pali. (304 aa)    
Predicted Functional Partners:
A0A2T6ZFU9
WD40-repeat-containing domain protein.
    
 0.955
A0A2T7A0F5
THO complex subunit 1 transcription elongation factor-domain-containing protein.
    
 0.955
A0A2T6ZPY1
P-loop containing nucleoside triphosphate hydrolase protein.
   
 0.953
A0A2T6ZRH2
Fms-interacting protein-domain-containing protein.
   
 0.946
A0A2T6ZMC8
Tho complex subunit 7-domain-containing protein.
   
 0.927
A0A2T6ZPJ8
mRNA splicing factor RNA helicase.
   
 0.922
A0A2T6ZKS8
Nuclear cap-binding protein subunit 2.
    
 0.891
A0A2T6ZDU1
MIF4G like-domain-containing protein.
    
 0.890
A0A2T6ZFV6
RRM domain-containing protein.
   
 0.885
A0A2T6ZT01
RRM domain-containing protein.
   
 0.885
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.