STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A2T7A2M5C3HC zinc finger-like-domain-containing protein. (459 aa)    
Predicted Functional Partners:
A0A2T6ZDI0
Uncharacterized protein.
    
  0.777
A0A2T6ZIC4
Uncharacterized protein.
    
  0.777
A0A2T7A6H3
Skp1 family, dimerization domain-domain-containing protein; Belongs to the SKP1 family.
    
  0.777
A0A2T7A708
Uncharacterized protein.
    
  0.777
A0A2T6ZHH7
RING-type domain-containing protein.
    
 0.738
A0A2T6ZN55
Cullin; Belongs to the cullin family.
    
  0.645
A0A2T6ZX93
Cullin; Belongs to the cullin family.
    
  0.645
A0A2T7A0V7
3'-5' exonuclease domain-containing protein.
      
 0.540
A0A2T6ZPL2
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
   
    0.530
A0A2T6ZDB7
SNF2 family N-terminal domain-domain-containing protein.
 
      0.439
Your Current Organism:
Tuber borchii
NCBI taxonomy Id: 42251
Other names: T. borchii, whitish truffle
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