STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LEO1LEO1 homolog, Paf1/RNA polymerase II complex component. (632 aa)    
Predicted Functional Partners:
CTR9
CTR9 homolog, Paf1/RNA polymerase II complex component.
   
 0.999
SSRP1
Structure specific recognition protein 1.
    
 0.999
ENSSARP00000000943
annotation not available
    
 0.999
POLR2B
RNA polymerase II subunit B.
    
 0.999
ENSSARP00000001402
annotation not available
   
  0.999
ENSSARP00000001412
annotation not available
   
 0.999
ENSSARP00000003012
annotation not available
    
 
 0.999
POLR2H
RNA polymerase II subunit H.
    
 0.999
ENSSARP00000003340
annotation not available
    
 0.999
NELFE
Negative elongation factor complex member E.
    
 0.999
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.