STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCRLOCRL inositol polyphosphate-5-phosphatase. (789 aa)    
Predicted Functional Partners:
SACM1L
SAC1 like phosphatidylinositide phosphatase.
 
  
 0.971
RAB8B
RAB8B, member RAS oncogene family.
    
 
 0.955
INPP5B
Inositol polyphosphate-5-phosphatase B.
  
 
 
0.950
ENSSARP00000003538
annotation not available
   
 
 0.901
PLCD1
Phospholipase C delta 1.
     
 0.884
PIK3R1
Phosphoinositide-3-kinase regulatory subunit 1.
    
 0.880
ENSSARP00000002199
annotation not available
    
 0.880
PLCG1
Phospholipase C gamma 1.
    
 0.880
SYNJ1
Synaptojanin 1.
 
  
 0.874
ENSSARP00000002032
annotation not available
     
 0.871
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.