STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2BC3H2B clustered histone 3. (126 aa)    
Predicted Functional Partners:
HDAC9
Histone deacetylase 9.
    
 0.903
HDAC6
Histone deacetylase 6.
    
 0.902
ENSSARP00000003871
annotation not available
    
 0.902
ENSSARP00000008041
annotation not available
    
 0.901
HDAC2
Histone deacetylase 2.
    
 0.883
HDAC1
Histone deacetylase 1.
    
 0.883
LEO1
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.880
H2AZ2
Histone H2A.V.
   
 0.825
RNF20
Ring finger protein 20.
    
 0.787
RNF40
Ring finger protein 40.
    
 0.780
Your Current Organism:
Sorex araneus
NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.