RNF220 protein (Sorex araneus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

RNF220

Ring finger protein 220. (568 aa)

Predicted Functional Partners:

ERI3

0.867

ENSSARP00000002827

0.758

ENSSARP00000009665

0.758

TMEM53

0.690

LRIG3

0.659

ZC4H2

0.644

ENSSARP00000010686

0.627

HECTD3

0.618

SH3RF1

0.611

ENSSARP00000006823

0.580

Your Current Organism:

Sorex araneus

NCBI taxonomy Id: 42254
Other names: Eurasian shrew, European shrew, S. araneus

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSSARP00000002827	ENSSARP00000006823	ENSSARP00000002827	ENSSARP00000006823	annotation not available	annotation not available	0.943
ENSSARP00000002827	ENSSARP00000009665	ENSSARP00000002827	ENSSARP00000009665	annotation not available	annotation not available	0.986
ENSSARP00000002827	LRIG3	ENSSARP00000002827	ENSSARP00000007206	annotation not available	Leucine rich repeats and immunoglobulin like domains 3.	0.757
ENSSARP00000002827	RNF220	ENSSARP00000002827	ENSSARP00000004599	annotation not available	Ring finger protein 220.	0.758
ENSSARP00000006823	ENSSARP00000002827	ENSSARP00000006823	ENSSARP00000002827	annotation not available	annotation not available	0.943
ENSSARP00000006823	ENSSARP00000009665	ENSSARP00000006823	ENSSARP00000009665	annotation not available	annotation not available	0.943
ENSSARP00000006823	ENSSARP00000010686	ENSSARP00000006823	ENSSARP00000010686	annotation not available	annotation not available	0.415
ENSSARP00000006823	LRIG3	ENSSARP00000006823	ENSSARP00000007206	annotation not available	Leucine rich repeats and immunoglobulin like domains 3.	0.497
ENSSARP00000006823	RNF220	ENSSARP00000006823	ENSSARP00000004599	annotation not available	Ring finger protein 220.	0.580
ENSSARP00000009665	ENSSARP00000002827	ENSSARP00000009665	ENSSARP00000002827	annotation not available	annotation not available	0.986
ENSSARP00000009665	ENSSARP00000006823	ENSSARP00000009665	ENSSARP00000006823	annotation not available	annotation not available	0.943
ENSSARP00000009665	LRIG3	ENSSARP00000009665	ENSSARP00000007206	annotation not available	Leucine rich repeats and immunoglobulin like domains 3.	0.757
ENSSARP00000009665	RNF220	ENSSARP00000009665	ENSSARP00000004599	annotation not available	Ring finger protein 220.	0.758
ENSSARP00000010686	ENSSARP00000006823	ENSSARP00000010686	ENSSARP00000006823	annotation not available	annotation not available	0.415
ENSSARP00000010686	RNF220	ENSSARP00000010686	ENSSARP00000004599	annotation not available	Ring finger protein 220.	0.627
ENSSARP00000010686	SH3RF1	ENSSARP00000010686	ENSSARP00000007332	annotation not available	SH3 domain containing ring finger 1.	0.585
ERI3	RNF220	ENSSARP00000010742	ENSSARP00000004599	ERI1 exoribonuclease family member 3.	Ring finger protein 220.	0.867
HECTD3	LRIG3	ENSSARP00000011719	ENSSARP00000007206	HECT domain E3 ubiquitin protein ligase 3.	Leucine rich repeats and immunoglobulin like domains 3.	0.402
HECTD3	RNF220	ENSSARP00000011719	ENSSARP00000004599	HECT domain E3 ubiquitin protein ligase 3.	Ring finger protein 220.	0.618
LRIG3	ENSSARP00000002827	ENSSARP00000007206	ENSSARP00000002827	Leucine rich repeats and immunoglobulin like domains 3.	annotation not available	0.757