STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY45406.1Hypothetical protein; COG:COG1704: Uncharacterized conserved protein [Function unknown]; Pfam:PF04011:LemA; Pfam:PF04011:LemA; SUPERFAMILY:SSF140478:LemA-like domain. (186 aa)    
Predicted Functional Partners:
htpX
COG:COG0501: Zn-dependent protease with chaperone function [Posttranslational modification protein turnover chaperones]; Pfam:PF01435:Peptidase M48; Hamap:MF_00188:Peptidase M48, protease HtpX, putative; Pfam:PF01435:Peptidase M48; Belongs to the peptidase M48B family.
 
    0.845
AHY45408.1
HGPRTase: hypoxanthine phosphoribosyltransferase; TIGRFAM:TIGR01203:Hypoxanthine phosphoribosyl transferase; COG:COG0634: Hypoxanthine-guanine phosphoribosyltransferase [Nucleotide transport and metabolism]; Pfam:PF00156:Phosphoribosyltransferase domain; SUPERFAMILY:SSF53271:No Description;KEGG: 00230; KEGG: 00983; MetaCyc: PWY-6599; MetaCyc: PWY-6609; UniPathway: UPA00591; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
       0.507
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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