STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47413.1COG:COG1131: ABC-type multidrug transport system ATPase component [Defense mechanisms]; Pfam:PF00005:ABC transporter-like; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase. (252 aa)    
Predicted Functional Partners:
AHY47412.1
COG:COG0842: ABC-type multidrug transport system permease component [Defense mechanisms]; Pfam:PF01061:ABC-2 type transporter; Pfam:PF01061:ABC-2 type transporter; PIRSF:PIRSF006648:No Description; PRINTS:PR00164:ABC-2 transporter; ProSiteProfiles:PS51012:ABC-2.
  
 0.965
AHY47411.1
Dolichyl-phosphate-mannose-protein mannosyltransferase; COG:COG5542: Predicted integral membrane protein [Function unknown]; Pfam:PF13231:Dolichyl-phosphate-mannose-protein mannosyltransferase.
       0.773
AHY47414.1
Flavin containing amine oxidoreductase; COG:COG1233: Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF01593:Amine oxidase; SUPERFAMILY:SSF51905:No Description.
       0.773
AHY46391.1
ABC-2 type transporter; COG:COG1682: ABC-type polysaccharide/polyol phosphate export systems permease component [Carbohydrate transport and metabolism / Cell envelope biogenesis outer membrane]; Pfam:PF01061:ABC-2 type transporter; PIRSF:PIRSF006648:No Description; PRINTS:PR00164:ABC-2 transporter; ProSiteProfiles:PS51012:ABC-2.
 
  
 0.739
AHY47806.1
TIGRFAM:TIGR01726:Amino acid ABC transporter, permease protein, 3-TM domain, His/Glu/Gln/Arg/opine family; COG:COG0765: ABC-type amino acid transport system permease component [Amino acid transport and metabolism]; Pfam:PF00528:Binding-protein-dependent transport systems inner membrane component; ProSiteProfiles:PS50928:Binding-protein-dependent transport systems inner membrane component; SUPERFAMILY:SSF161098:No Description; HEQRo_perm_3TM.
      0.710
AHY47410.1
Hypothetical Protein; Ab initio prediction:Prodigal:2.60.
       0.645
AHY45564.1
ABC-2 family transporter protein; COG:COG1277: ABC-type transport system involved in multi-copper enzyme maturation permease component [General function prediction only]; Pfam:PF12679:ABC-2 family transporter protein.
  
 
 0.623
AHY47092.1
COG:COG0411: ABC-type branched-chain amino acid transport systems ATPase component [Amino acid transport and metabolism]; Pfam:PF00005:ABC transporter-like; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SMART:SM00382:AAA+ ATPase domain; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
     
0.623
AHY47196.1
COG:COG1122: ABC-type cobalt transport system ATPase component [Inorganic ion transport and metabolism]; Pfam:PF00005:ABC transporter-like; Pfam:PF00005:ABC transporter-like; ProSitePatterns:PS00211:ABC transporter, conserved site; ProSiteProfiles:PS50893:ABC transporter-like; SUPERFAMILY:SSF52540:P-loop containing nucleoside triphosphate hydrolase.
 
   
0.598
AHY47415.1
Pfam:PF14103:Protein of unknown function DUF4276.
       0.590
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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