STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AHY47769.1COG:COG0145: N-methylhydantoinase A/acetone carboxylase beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF01968:Hydantoinase/oxoprolinase; Pfam:PF01968:Hydantoinase/oxoprolinase; SUPERFAMILY:SSF53067:No Description. (659 aa)    
Predicted Functional Partners:
AHY46902.1
COG:COG0146: N-methylhydantoinase B/acetone carboxylase alpha subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF02538:Hydantoinase B/oxoprolinase; Pfam:PF02538:Hydantoinase B/oxoprolinase.
 0.999
AHY47768.1
COG:COG0146: N-methylhydantoinase B/acetone carboxylase alpha subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF02538:Hydantoinase B/oxoprolinase; Pfam:PF02538:Hydantoinase B/oxoprolinase.
 0.999
AHY46903.1
COG:COG0145: N-methylhydantoinase A/acetone carboxylase beta subunit [Amino acid transport and metabolism / Secondary metabolites biosynthesis transport and catabolism]; Pfam:PF01968:Hydantoinase/oxoprolinase; Pfam:PF01968:Hydantoinase/oxoprolinase; SUPERFAMILY:SSF53067:No Description.
  
  
 
0.910
AHY47770.1
COG:COG1914: Mn2+ and Fe2+ transporters of the NRAMP family [Inorganic ion transport and metabolism]; Pfam:PF01566:Natural resistance-associated macrophage like; Pfam:PF01566:Natural resistance-associated macrophage like; PRINTS:PR00447:Natural resistance-associated macrophage like.
       0.781
AHY47771.1
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; COG:COG4585: Signal transduction histidine kinase [Signal transduction mechanisms]; Pfam:PF02518:Histidine kinase-like ATPase, ATP-binding domain; ProSiteProfiles:PS50109:Signal transduction histidine kinase, core; SUPERFAMILY:SSF55874:Histidine kinase-like ATPase, ATP-binding domain.
       0.458
Your Current Organism:
Rubrobacter radiotolerans
NCBI taxonomy Id: 42256
Other names: ATCC 51242, Arthrobacter radiotolerans, CIP 106991, DSM 46359, DSM 5868, IAM 12072, IFO 14777, JCM 2153, NBRC 14777, R. radiotolerans, strain P-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.