STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251SM11Putative splicing factor-related protein. (706 aa)    
Predicted Functional Partners:
A0A251V0Z9
Putative P-loop containing nucleoside triphosphate hydrolases superfamily protein.
   
 0.948
A0A251SRL4
Putative hydroxyproline-rich glycoprotein family protein.
   
 0.947
ATCDC5
Putative cell division cycle 5.
   
 
 0.929
ATO
Putative splicing factor.
   
 0.896
A0A251TVE0
DUF3449 domain-containing protein.
   
 0.896
A0A251TVZ0
Putative splicing factor SF3a60 binding domain, SF3A3 domain, Splicing factor 3A subunit 3.
   
 0.896
A0A251T718
Uncharacterized protein.
   
 0.858
SF3B1
Putative U2 snRNP component prp10.
   
 0.856
A0A251VKM7
Putative splicing factor, putative.
   
 0.856
A0A251RM53
Uncharacterized protein.
   
 0.845
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.