STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251SPA5Putative vacuolar protein sorting-associated protein 17, Vps17. (401 aa)    
Predicted Functional Partners:
SNX1
Putative sorting nexin 1.
  
  
 
0.900
MAG1
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.757
VPS29
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.757
VPS26B
Putative vacuolar protein sorting 26B.
    
 
 0.689
VPS26A
Putative vacuolar protein sorting 26A.
    
 
 0.689
A0A251S5B0
Putative biogenesis of lysosome-related organelles complex-1, subunit 2.
    
 
 0.586
BL1S1
Putative biogenesis of lysosome-related organelles complex 1 subunit 1.
    
 0.533
VPS35A
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.519
VPS35B
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 
 0.519
A0A251TYL8
Putative vacuolar protein sorting-associated protein 35.
   
 
 0.519
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
Server load: low (16%) [HD]