STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251TP99Putative ubiA prenyltransferase family. (408 aa)    
Predicted Functional Partners:
A0A251TZT8
Putative geranylgeranyl reductase, plant/prokaryotic.
  
 
 0.697
A0A251V8X1
Putative geranylgeranyl reductase, plant/prokaryotic.
  
 
 0.697
CHLP
Putative geranylgeranyl diphosphate reductase protein.
  
 
 0.696
CHLP-2
Putative geranylgeranyl diphosphate reductase protein.
  
 
 0.696
A0A251TVN7
Putative isopentenyl-diphosphate delta-isomerase, type 1, NUDIX hydrolase domain-like protein.
  
 
 0.663
IDI1
Putative isopentenyl-diphosphate Delta-isomerase I.
  
 
 0.663
IDI2
Putative isopentenyl-diphosphate Delta-isomerase II.
  
 
 0.663
A0A251TL79
Putative ubiA prenyltransferase family, 2-carboxy-1,4-naphthoquinone phytyltransferase.
    
 0.653
A0A251TVF4
Putative transposase, Ptta/En/Spm, plant.
    
 0.653
A0A251SNC3
4-hydroxyphenylpyruvate dioxygenase.
     
 0.635
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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