STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251TPS1Putative EF-hand domain pair. (117 aa)    
Predicted Functional Partners:
ATRAD4
Putative DNA repair protein Rad4 family.
    
 0.885
ZWI
Putative kinesin-like calmodulin-binding protein (ZWICHEL); Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
    
 0.819
A0A251T8Y4
Uncharacterized protein.
   
 
 0.767
A0A251TQM8
Uncharacterized protein.
    
 
 0.700
A0A251TV27
Putative SAC3/GANP/Nin1/mts3/eIF-3 p25 family.
    
 
 0.699
A0A251UW42
Putative SAC3/GANP/Nin1/mts3/eIF-3 p25 family.
    
 
 0.699
ISPE
Putative 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic/chromoplastic.
     
 0.615
ATGTF2H2
General transcription factor IIH subunit.
     
 0.606
A0A251RQN5
Putative UV excision repair protein Rad23, UBA-like protein.
   
 0.598
A0A251RU22
Putative UV excision repair protein Rad23, UBA-like, Ubiquilin, Ubiquitin-related domain protein.
   
 0.598
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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