STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251TRJ9Putative glycoside hydrolase family 17; Belongs to the glycosyl hydrolase 17 family. (200 aa)    
Predicted Functional Partners:
ATARP4
Putative actin-related protein 4; Belongs to the actin family.
    
 0.804
LFR
Putative ARM repeat superfamily protein.
    
 0.730
A0A251RUX0
Putative dnaJ domain-containing protein.
    
 0.650
A0A251S2G9
Putative dnaJ domain-containing protein.
    
 0.650
BSH
Putative transcription regulatory protein SNF5, putative (BSH).
    
 0.650
A0A251SN16
Putative SWIB/MDM2 domain-containing protein.
    
 0.644
CHC1
Putative SWIB/MDM2 domain superfamily protein.
    
 0.644
SMRD3
Putative actin-dependent regulator of chromatin.
    
 0.644
CHB3
Putative DNA-binding family protein.
    
 0.596
ATSWI3B
Putative switch subunit 3.
    
 0.596
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.