STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251U5Q0Putative NB-ARC, Leucine-rich repeat domain, L domain-like protein. (697 aa)    
Predicted Functional Partners:
SRPP
Putative small rubber particle protein.
      
 0.691
A0A251RPK1
Putative glycosyl hydrolases family 32 protein; Belongs to the glycosyl hydrolase 32 family.
      
 0.621
MNP
Putative GATA type zinc finger transcription factor family protein.
      
 0.499
A0A251SBW7
Putative squalene epoxidase, FAD/NAD(P)-binding domain protein.
      
 0.497
A0A251SIG6
Putative squalene epoxidase, FAD/NAD(P)-binding domain protein.
      
 0.497
SQP1
Putative FAD/NAD(P)-binding oxidoreductase family protein.
      
 0.497
A0A251TR65
Putative squalene epoxidase, FAD/NAD(P)-binding domain protein.
      
 0.497
A0A251UN24
Putative squalene monooxygenase.
      
 0.497
A0A251UZU4
Putative squalene epoxidase, FAD/NAD(P)-binding domain protein.
      
 0.497
A0A251TBE0
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.
      
 0.461
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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