STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251UBB2Uncharacterized protein. (1039 aa)    
Predicted Functional Partners:
A0A251V3L1
Nuclear pore protein.
   
 0.910
A0A251SJM1
Putative nucleoporin.
   
 0.894
A0A251SRG1
Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC).
   
 0.842
A0A251T090
Putative reverse transcriptase domain, Nucleoporin, Nup155-like protein.
   
 0.840
NUP155
Putative nucleoporin.
   
 0.840
A0A251TBC1
Uncharacterized protein.
   
 0.837
A0A251U1B1
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.837
A0A251RR57
Putative glu-tRNAGln amidotransferase C subunit.
   
 0.833
A0A251U0Z9
Nup54 domain-containing protein.
   
 0.831
A0A251V668
Putative nucleoporin Nup54/Nup57/Nup44.
   
 0.831
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.