STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251UK22Putative pentatricopeptide repeat (PPR) superfamily protein. (528 aa)    
Predicted Functional Partners:
A0A251ST33
Putative RNA-binding (RRM/RBD/RNP motifs) family protein.
      
 0.589
A0A251U2C5
Putative nucleotide-binding alpha-beta plait domain-containing protein.
      
 0.544
A0A251TUW6
Putative tetratricopeptide repeat (TPR)-like superfamily protein.
      
 0.524
A0A251U810
Putative pre-mRNA processing ribonucleoprotein binding region-containing protein.
      
 0.523
A0A251T1I5
Uncharacterized protein.
      
 0.520
A0A251TDA2
Putative tetratricopeptide-like helical domain-containing protein.
      
 0.513
A0A251VRH5
Putative tetratricopeptide repeat (TPR)-like superfamily protein.
      
 0.513
GR-RBP4
Putative glycine-rich RNA-binding protein 4.
    
 
 0.421
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.