STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A251UU60Pectinesterase; In the C-terminal section; belongs to the pectinesterase family. (536 aa)    
Predicted Functional Partners:
PMR6
Pectate lyase.
  
 
 0.766
A0A251TU86
Pectate lyase.
  
 
 0.763
A0A251VI46
Pectate lyase.
  
 
  0.757
A0A251RPF1
Pectate lyase.
  
 
  0.756
A0A251UCS6
Pectate lyase.
  
 
  0.755
A0A251UTJ3
Pectate lyase.
  
 
 0.755
A0A251SRP4
Pectate lyase.
  
 
  0.754
QRT2
Putative pectin lyase-like superfamily protein.
  
  
 0.750
A0A251SSF0
Pectate lyase.
  
 
 0.749
A0A251S8U8
Pectate lyase.
  
 
  0.745
Your Current Organism:
Helianthus annuus
NCBI taxonomy Id: 4232
Other names: H. annuus, Helianthus annuus L., common sunflower
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.