STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103699922Ent-copalyl diphosphate synthase 1, chloroplastic-like. (279 aa)    
Predicted Functional Partners:
LOC103705932
Diphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprene-containing compounds such as sterols and terpenoids. Belongs to the diphosphomevalonate decarboxylase family.
  
 0.815
LOC103698937
Ent-copalyl diphosphate synthase 1, chloroplastic-like; Belongs to the terpene synthase family.
 
      0.718
LOC103717960
2-carboxy-1,4-naphthoquinone phytyltransferase, chloroplastic isoform X1.
    
 0.649
LOC103696624
Isopentenyl-diphosphate Delta-isomerase I-like.
  
 
 0.647
LOC113462629
LOW QUALITY PROTEIN: isopentenyl-diphosphate Delta-isomerase I-like.
  
 
 0.647
LOC103705690
Isopentenyl-diphosphate Delta-isomerase I.
  
 
 0.647
LOC103711437
Squalene synthase-like isoform X1.
  
 0.645
LOC103712070
Squalene synthase-like isoform X1.
  
 0.645
LOC103719284
Phytoene synthase 2, chloroplastic-like isoform X1.
  
 0.645
LOC103723585
Phytoene synthase 2, chloroplastic-like.
  
 0.645
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.