STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103714532Tetrapyrrole-binding protein, chloroplastic. (282 aa)    
Predicted Functional Partners:
LOC103698135
Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic.
   
  
 0.670
LOC103702743
LOW QUALITY PROTEIN: chlorophyllide a oxygenase, chloroplastic.
   
  
 0.669
LOC103716430
Magnesium-chelatase subunit ChlH, chloroplastic.
   
  
 0.651
LOC103697115
Magnesium protoporphyrin IX methyltransferase, chloroplastic.
   
  
 0.630
LOC103703012
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family.
   
  
 0.600
LOC103719218
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family.
      
 0.586
LOC103721025
Pentatricopeptide repeat-containing protein At2g31400, chloroplastic.
      
 0.560
LOC103709366
Chlorophyll synthase, chloroplastic.
   
 
 0.557
LOC103714553
Serine/threonine-protein kinase-like protein CR4.
    
 
 0.553
LOC103697920
Receptor like protein kinase S.2.
    
 
 0.551
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.