STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103716517Uncharacterized protein LOC103716517. (757 aa)    
Predicted Functional Partners:
LOC103709551
xaa-Pro dipeptidase.
   
 
 0.544
LOC103711615
LOW QUALITY PROTEIN: acylamino-acid-releasing enzyme 1.
    
 
0.528
LOC103719383
LOW QUALITY PROTEIN: tripeptidyl-peptidase 2.
      
 0.515
LOC103697145
LOW QUALITY PROTEIN: probable RNA helicase SDE3.
      
 0.504
LOC103718089
Probable RNA helicase SDE3.
      
 0.504
LOC103701430
Stromal processing peptidase, chloroplastic isoform X1.
   
 
 0.442
LOC103712518
Uncharacterized protein LOC103712518.
    
 
 0.438
LOC103719541
Uncharacterized protein LOC103719541 isoform X1.
      
 0.431
LOC103713641
Probable aspartyl protease At4g16563; Belongs to the peptidase A1 family.
      
 0.410
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.