STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103716616Prohibitin. (289 aa)    
Predicted Functional Partners:
LOC103717346
Prohibitin.
  
0.984
LOC103721125
Prohibitin.
  
0.984
LOC103696033
Calcium uptake protein, mitochondrial isoform X1.
    
 0.798
LOC103709247
Probable mitochondrial-processing peptidase subunit beta, mitochondrial; Belongs to the peptidase M16 family.
  
 0.730
LOC103718185
Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.730
LOC103718183
Probable mitochondrial-processing peptidase subunit beta, mitochondrial; Belongs to the peptidase M16 family.
  
 0.730
LOC103720539
Probable mitochondrial-processing peptidase subunit beta, mitochondrial; Belongs to the peptidase M16 family.
  
 0.730
LOC103709279
Biotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
  
 0.730
LOC103695865
Histone deacetylase 6.
    
 
 0.696
LOC103713721
Ataxin-3 homolog.
    
 
 0.684
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.