STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103716911Uncharacterized protein LOC103716911. (303 aa)    
Predicted Functional Partners:
LOC103706289
4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplastic.
     
 0.568
LOC103713387
Thymidylate kinase isoform X1.
     
 0.493
LOC103705632
Sec-independent protein translocase protein TATC, chloroplastic isoform X1.
     
 0.468
LOC103715160
Sec-independent protein translocase protein TATC, chloroplastic-like.
     
 0.468
LOC103696358
Protein LOL2.
   
  
 0.466
LOC103715867
Malate synthase, glyoxysomal.
      
 0.429
LOC103708015
Mevalonate kinase.
      
 0.422
LOC103715470
Uncharacterized protein LOC103715470.
      
 0.410
LOC103704530
Sec-independent protein translocase protein TATA, chloroplastic-like.
     
 0.405
LOC103705988
Sec-independent protein translocase protein TATA, chloroplastic-like.
     
 0.405
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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