STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103708674E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1. (294 aa)    
Predicted Functional Partners:
LOC103717006
Protein MHF2 homolog.
    
 
 0.523
LOC103711660
DNA mismatch repair protein MSH4.
      
 0.521
LOC103697535
DNA mismatch repair protein MSH5.
      
 0.518
LOC103710567
Protein SHORTAGE IN CHIASMATA 1.
      
 0.518
LOC103703796
ATP-dependent DNA helicase MER3 homolog.
      
 0.517
LOC103706511
ATPase family AAA domain-containing protein FIGL1; Belongs to the AAA ATPase family.
      
 0.517
LOC103708046
Protein MHF1 homolog isoform X1.
    
 
 0.517
LOC103701407
DEAD-box ATP-dependent RNA helicase FANCM.
      
 0.517
LOC103723997
DNA mismatch repair protein MLH3 isoform X1.
      
 0.516
LOC103716372
Meiotic recombination protein DMC1 homolog; Belongs to the RecA family.
      
 0.516
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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