STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108511813LOW QUALITY PROTEIN: transcription repressor OFP13. (218 aa)    
Predicted Functional Partners:
LOC103699876
Eukaryotic translation initiation factor NCBP; Belongs to the eukaryotic initiation factor 4E family.
    
 
 0.715
LOC103698464
DEAD-box ATP-dependent RNA helicase 6; Belongs to the DEAD box helicase family.
    
 
 0.606
LOC103710556
DEAD-box ATP-dependent RNA helicase 8-like; Belongs to the DEAD box helicase family.
    
 
 0.606
LOC103710295
DEAD-box ATP-dependent RNA helicase 8-like; Belongs to the DEAD box helicase family.
    
 
 0.606
LOC103709642
E3 ubiquitin-protein ligase hel2-like.
    
 
 0.444
LOC103703237
Transcription repressor OFP8.
      
 0.420
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.