STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103702796Polygalacturonate 4-alpha-galacturonosyltransferase-like. (358 aa)    
Predicted Functional Partners:
LOC103701187
UDP-glucuronate 4-epimerase 1-like.
     
 0.731
LOC103710462
UDP-glucuronate 4-epimerase 1.
     
 0.731
LOC103709399
UDP-glucuronate 4-epimerase 6-like.
     
 0.728
LOC103710614
LOW QUALITY PROTEIN: UDP-glucuronate 4-epimerase 6-like.
     
 0.728
LOC103717980
UTP--glucose-1-phosphate uridylyltransferase.
     
 0.682
LOC103700226
UDP-glucuronate 4-epimerase 4-like.
     
 0.655
LOC103710561
UDP-glucuronate 4-epimerase 3-like.
     
 0.655
LOC103704794
Probable sucrose-phosphate synthase 4.
     
 0.621
LOC103710588
Probable sucrose-phosphate synthase 2; Belongs to the glycosyltransferase 1 family.
     
 0.613
LOC103710846
Probable sucrose-phosphate synthase 2 isoform X1; Belongs to the glycosyltransferase 1 family.
     
 0.613
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.