STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103708056Protein CYCLOPS-like. (534 aa)    
Predicted Functional Partners:
LOC103701208
pre-mRNA-splicing factor ISY1 homolog.
   
 0.968
LOC103706735
pre-mRNA-splicing factor SYF1.
    
 0.964
LOC103708791
Crooked neck-like protein 1.
    
 0.963
LOC103723728
LOW QUALITY PROTEIN: SNW/SKI-interacting protein A-like.
    
 0.963
LOC103711264
RNA helicase aquarius.
    
  0.936
LOC103699000
Zinc finger CCCH domain-containing protein 40.
   
 0.926
LOC103699574
Zinc finger CCCH domain-containing protein 49-like.
   
 0.926
LOC103714100
Zinc finger CCCH domain-containing protein 40-like.
   
 0.926
LOC103712222
Protein CWC15 homolog A.
   
 
 0.917
LOC103703613
Protein pleiotropic regulatory locus 1-like.
   
 
 0.906
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.