STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103718413D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (594 aa)    
Predicted Functional Partners:
LOC103719918
Phosphoserine aminotransferase 2, chloroplastic-like.
  
 0.985
LOC103719919
Phosphoserine aminotransferase.
  
 0.985
LOC103722714
D-glycerate 3-kinase, chloroplastic.
     
 0.947
LOC103707887
Uncharacterized protein LOC103707887.
   
 0.914
LOC103720318
Uncharacterized protein LOC103720318.
   
 0.914
LOC103722947
LOW QUALITY PROTEIN: phosphoglycerate mutase-like protein 4.
   
 0.914
LOC103705911
2,3-bisphosphoglycerate-independent phosphoglycerate mutase-like.
    
 0.909
LOC103717874
2,3-bisphosphoglycerate-independent phosphoglycerate mutase.
    
 0.909
LOC103723177
2,3-bisphosphoglycerate-independent phosphoglycerate mutase-like isoform X1.
    
 0.909
LOC103712887
Uncharacterized protein LOC103712887.
  
 0.858
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.