STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO47389.1Amino acid adenylation domain-containing protein. (1109 aa)    
Predicted Functional Partners:
SEO47435.1
Acyl transferase domain-containing protein.
0.999
SEO76156.1
Acyl transferase domain-containing protein.
 0.999
SEO76131.1
8-amino-7-oxononanoate synthase.
 
 0.997
SEO47584.1
MbtH protein.
 
 0.995
SEO47472.1
Amino acid adenylation domain-containing protein.
 
0.983
SEN98966.1
fatty-acyl-CoA synthase.
 0.981
hemL
Glutamate-1-semialdehyde 2,1-aminomutase.
  
 0.965
SEO47549.1
Surfactin synthase thioesterase subunit.
  
 0.940
SEO47352.1
Non-ribosomal peptide synthase domain TIGR01720/amino acid adenylation domain-containing protein.
 
0.939
SEO47508.1
4'-phosphopantetheinyl transferase; Belongs to the P-Pant transferase superfamily.
 
 
 0.938
Your Current Organism:
Nitrosomonas oligotropha
NCBI taxonomy Id: 42354
Other names: N. oligotropha, Nitrosomonas oligotropha Koops et al. 2001, strain Nm 45
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