STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_4X161901Fe2OG dioxygenase domain-containing protein. (296 aa)    
Predicted Functional Partners:
LSAT_4X129320
Pyrroline-5-carboxylate reductase; Belongs to the pyrroline-5-carboxylate reductase family.
     
  0.900
LSAT_5X110541
Proline iminopeptidase.
     
  0.900
LSAT_4X175400
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
     
 0.714
LSAT_3X94760
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
     
 0.714
LSAT_2X86240
Proline dehydrogenase; Converts proline to delta-1-pyrroline-5-carboxylate.
     
 0.714
LSAT_8X150700
Uncharacterized protein.
      
 0.444
LSAT_1X29981
Uncharacterized protein.
      
 0.436
LSAT_4X85441
Uncharacterized protein.
      
 0.436
LSAT_5X9501
Uncharacterized protein.
      
 0.436
LSAT_4X13500
Uncharacterized protein.
      
 0.436
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.