STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pepALeucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides. (502 aa)    
Predicted Functional Partners:
Ssed_3420
KEGG: she:Shewmr4_0949 peptidase M17, leucyl aminopeptidase domain protein; Belongs to the peptidase M17 family.
  
 
 
0.929
gshB
KEGG: slo:Shew_3225 glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
   
 
 0.925
Ssed_3897
PepB aminopeptidase; Probably plays an important role in intracellular peptide degradation.
  
  
 
0.924
Ssed_1488
KEGG: slo:Shew_1677 leucyl aminopeptidase; Belongs to the peptidase M17 family.
  
  
 
0.922
Ssed_3421
Xaa-His dipeptidase; KEGG: slo:Shew_2852 aminoacyl-histidine dipeptidase.
   
 
 0.919
Ssed_0913
KEGG: she:Shewmr4_3040 aminopeptidase N.
   
 0.913
Ssed_2482
KEGG: slo:Shew_1803 aminopeptidase N.
   
 0.913
Ssed_2691
KEGG: she:Shewmr4_2301 dipeptidase, putative.
  
 
 0.907
Ssed_0948
KEGG: shw:Sputw3181_0717 gamma-glutamyltransferase.
     
 0.905
Ssed_2689
KEGG: she:Shewmr4_2297 gamma-glutamyltransferase.
     
 0.905
Your Current Organism:
Shewanella sediminis
NCBI taxonomy Id: 425104
Other names: S. sediminis HAW-EB3, Shewanella sediminis HAW-EB3, Shewanella sediminis str. HAW-EB3, Shewanella sediminis strain HAW-EB3
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