STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Ssed_4132Adenylate cyclase; KEGG: slo:Shew_0319 putative adenylate cyclase; Belongs to the adenylyl cyclase class-1 family. (807 aa)    
Predicted Functional Partners:
cpdA
Calcineurin phosphoesterase C-terminal domain protein; Hydrolyzes cAMP to 5'-AMP. Plays an important regulatory role in modulating the intracellular concentration of cAMP, thereby influencing cAMP-dependent processes.
  
  
 0.975
Ssed_1050
KEGG: ppr:PBPRB0776 putative adenylate cyclase CyaB.
  
  
 0.957
Ssed_1130
KEGG: sbl:Sbal_1182 putative adenylate/guanylate cyclase.
  
  
 0.948
Ssed_3621
KEGG: hha:Hhal_1889 putative adenylate/guanylate cyclase.
     
 0.918
Ssed_1600
KEGG: slo:Shew_2449 anaerobic ribonucleoside-triphosphate reductase.
  
  
  0.916
Ssed_2068
KEGG: slo:Shew_2050 pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.903
Ssed_0334
GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
 0.901
Ssed_1287
GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance.
     
 0.901
Ssed_0365
KEGG: sfr:Sfri_3881 adenylate cyclase.
     
  0.900
Ssed_1288
KEGG: saz:Sama_1034 MazG family protein.
     
  0.900
Your Current Organism:
Shewanella sediminis
NCBI taxonomy Id: 425104
Other names: S. sediminis HAW-EB3, Shewanella sediminis HAW-EB3, Shewanella sediminis str. HAW-EB3, Shewanella sediminis strain HAW-EB3
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