STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M446_0810PFAM: protein of unknown function DUF927; KEGG: gdi:GDI3600 hypothetical protein. (930 aa)    
Predicted Functional Partners:
M446_0807
Hypothetical protein.
       0.773
M446_0808
Hypothetical protein.
       0.773
M446_0809
Hypothetical protein.
       0.773
M446_0806
Hypothetical protein.
       0.470
M446_6722
PFAM: integrase family protein; KEGG: rsq:Rsph17025_0112 phage integrase family protein; Belongs to the 'phage' integrase family.
 
  
 0.423
M446_0803
KEGG: lpc:LPC_0212 hypothetical protein.
 
     0.415
Your Current Organism:
Methylobacterium sp. 446
NCBI taxonomy Id: 426117
Other names: M. sp. 4-46, Methylobacterium sp. 4-46
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