STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M446_0912PFAM: Stage II sporulation E family protein; Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: mlo:mlr2361 probable phosphoprotein phosphatase. (276 aa)    
Predicted Functional Partners:
M446_0913
PFAM: protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: bja:blr3604 probable serine/threonine kinase.
 
 
 0.980
M446_5897
Transketolase central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2.
   
 0.969
M446_1241
TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: biotin/lipoyl attachment domain-containing protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: nmu:Nmul_A0515 dihydrolipoamide dehydrogenase.
  
 0.924
M446_0152
Putative signal transduction protein with EFhand domain; PFAM: Calcium-binding EF-hand-containing protein; KEGG: rle:RL1893 putative transmembrane protein.
    
 0.790
M446_0966
PFAM: Fmu (Sun) domain protein; KEGG: mex:Mext_2934 Fmu (Sun) domain protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.762
M446_2963
PFAM: Fmu (Sun) domain protein; NusB/RsmB/TIM44; methyltransferase small; Methyltransferase type 11; KEGG: mex:Mext_0551 Fmu (Sun) domain protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
  
 
 0.762
M446_3866
PFAM: FAD dependent oxidoreductase; glycine cleavage T protein (aminomethyl transferase); Glycine cleavage T-protein barrel; KEGG: pde:Pden_4916 FAD dependent oxidoreductase; Belongs to the GcvT family.
   
 0.751
M446_0319
PFAM: formyl transferase domain protein; KEGG: mex:Mext_2540 formyl transferase domain protein.
  
   0.750
M446_1459
KEGG: mlo:mlr2091 hypothetical protein.
  
   0.750
M446_2572
Methionyl-tRNA formyltransferase; PFAM: formyl transferase domain protein; KEGG: pnu:Pnuc_0641 methionyl-tRNA formyltransferase.
  
   0.750
Your Current Organism:
Methylobacterium sp. 446
NCBI taxonomy Id: 426117
Other names: M. sp. 4-46, Methylobacterium sp. 4-46
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