STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M446_2305KEGG: rpc:RPC_4179 putative branched-chain amino acid ABC transport system substrate-binding protein. (424 aa)    
Predicted Functional Partners:
M446_2306
PFAM: inner-membrane translocator; KEGG: rpc:RPC_4178 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
 0.992
M446_2307
PFAM: inner-membrane translocator; KEGG: xau:Xaut_1862 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 
  0.991
M446_2309
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: bja:blr5962 ABC transporter ATP-binding protein.
 
    0.911
M446_2308
PFAM: AMP-dependent synthetase and ligase; KEGG: bbt:BBta_5715 putative long-chain-fatty-acid-CoA ligase.
 
    0.894
M446_2304
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpb:RPB_1555 ABC transporter related.
 
    0.856
M446_2311
KEGG: bbt:BBta_5720 putative phenylacetate-CoA ligase.
 
    0.745
M446_1977
PFAM: inner-membrane translocator; KEGG: mag:amb1477 branched-chain amino acid ABC-type transport system; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.668
M446_1796
ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: xau:Xaut_4055 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.666
M446_6491
ABC transporter related; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_1697 ABC transporter related; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.666
M446_3841
PFAM: inner-membrane translocator; KEGG: azc:AZC_3002 ABC transport permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.460
Your Current Organism:
Methylobacterium sp. 446
NCBI taxonomy Id: 426117
Other names: M. sp. 4-46, Methylobacterium sp. 4-46
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.