STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
M446_5821KEGG: nha:Nham_4184 hypothetical protein. (194 aa)    
Predicted Functional Partners:
M446_5824
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mex:Mext_0216 4Fe-4S ferredoxin iron-sulfur binding domain protein.
 
  
 0.959
M446_5822
KEGG: mex:Mext_0218 hypothetical protein.
 
  
 0.956
M446_5823
PFAM: Polysulphide reductase NrfD; KEGG: mex:Mext_0217 polysulphide reductase NrfD.
 
   
 0.955
M446_5818
KEGG: nha:Nham_4181 hypothetical protein.
 
   
 0.953
M446_5820
KEGG: nha:Nham_4183 hypothetical protein.
 
    0.953
M446_5825
KEGG: mex:Mext_0215 chaperone protein HtpG.
 
   
 0.953
M446_5817
TIGRFAM: cytochrome c oxidase, subunit II; PFAM: cytochrome c oxidase subunit II; cytochrome c class I; KEGG: nha:Nham_4180 cytochrome c oxidase, subunit II.
 
   
 0.951
M446_5815
PFAM: cytochrome c oxidase subunit III; KEGG: nha:Nham_4178 cytochrome c oxidase, subunit III.
 
   
 0.927
M446_5816
KEGG: nha:Nham_4179 cytochrome c oxidase, subunit I; TIGRFAM: cytochrome c oxidase, subunit I; PFAM: cytochrome c oxidase subunit I; Belongs to the heme-copper respiratory oxidase family.
 
   
 0.885
M446_5827
PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: ade:Adeh_0823 4Fe-4S ferredoxin, iron-sulfur binding protein.
 
   
 0.821
Your Current Organism:
Methylobacterium sp. 446
NCBI taxonomy Id: 426117
Other names: M. sp. 4-46, Methylobacterium sp. 4-46
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