STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ACB24006.1PFAM: Collagen triple helix repeat; KEGG: mex:Mext_0878 collagen triple helix repeat. (308 aa)    
Predicted Functional Partners:
ACB26199.1
TIGRFAM: outer membrane autotransporter barrel domain protein; autotransporter-associated beta strand repeat protein; PFAM: peptidase S8 and S53 subtilisin kexin sedolisin; Autotransporter beta- domain protein; KEGG: azc:AZC_1504 putative serine protease.
  
 
 0.757
ACB27640.1
KEGG: azc:AZC_0840 hypothetical protein.
    
 
 0.695
ACB23689.1
KEGG: mex:Mext_0617 hypothetical protein.
    
 
 0.680
ACB25357.1
Porin; KEGG: mex:Mext_4443 porin.
    
 
 0.670
ACB25823.1
Porin; PFAM: porin; KEGG: mex:Mext_2745 porin.
    
 
 0.670
ACB25724.1
PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: mex:Mext_4034 cell divisionFtsK/SpoIIIE; Belongs to the FtsK/SpoIIIE/SftA family.
   
 
 0.669
ACB26090.1
PFAM: cell divisionFtsK/SpoIIIE; SMART: AAA ATPase; KEGG: mex:Mext_2101 cell divisionFtsK/SpoIIIE.
   
 
 0.669
ACB27305.1
PFAM: glycoside hydrolase family 5; KEGG: mlo:mlr2086 cellulase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
    
 
 0.658
ACB22962.1
Beta-ketoacyl synthase; PFAM: short-chain dehydrogenase/reductase SDR; phosphopantetheine-binding; Alcohol dehydrogenase zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KR domain protein; Beta-ketoacyl synthase; Acyl transferase; KEGG: mex:Mext_1947 beta-ketoacyl synthase.
 
 
 0.649
ACB26926.1
PFAM: peptidase S1 and S6 chymotrypsin/Hap; KEGG: mex:Mext_1430 peptidase S1 and S6 chymotrypsin/Hap.
  
   
 0.555
Your Current Organism:
Methylobacterium radiotolerans
NCBI taxonomy Id: 426355
Other names: M. radiotolerans JCM 2831, Methylobacterium radiotolerans ATCC 27329, Methylobacterium radiotolerans IAM 12098, Methylobacterium radiotolerans JCM 2831, Methylobacterium radiotolerans str. JCM 2831, Methylobacterium radiotolerans strain JCM 2831
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