STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ribLCytidyltransferase-related domain; Catalyzes the transfer of the AMP portion of ATP to flavin mononucleotide (FMN) to produce flavin adenine dinucleotide (FAD) coenzyme. (150 aa)    
Predicted Functional Partners:
ribK
Protein of unknown function DUF120; Catalyzes the CTP-dependent phosphorylation of riboflavin (vitamin B2) to form flavin mononucleotide (FMN); Belongs to the archaeal riboflavin kinase family.
     
 0.973
ABR65259.1
PFAM: protein of unknown function DUF81; KEGG: mmq:MmarC5_0749 protein of unknown function DUF81.
  
    0.785
ribH
6,7-dimethyl-8-ribityllumazine synthase; Catalyzes the formation of 6,7-dimethyl-8-ribityllumazine by condensation of 5-amino-6-(D-ribitylamino)uracil with 3,4-dihydroxy-2- butanone 4-phosphate. This is the penultimate step in the biosynthesis of riboflavin; Belongs to the DMRL synthase family.
  
  
 0.784
ABR65261.1
PFAM: protein of unknown function UPF0118; KEGG: mmp:MMP0944 hypothetical protein.
       0.740
pyrD
Dihydroorotate dehydrogenase family protein; Catalyzes the conversion of dihydroorotate to orotate.
     
 0.703
ABR66184.1
TIGRFAM: biotin--acetyl-CoA-carboxylase ligase; PFAM: biotin/lipoate A/B protein ligase; KEGG: mmp:MMP0119 biotin--protein ligase.
 
   
 0.687
ABR65258.1
PFAM: PUA domain containing protein; phosphoadenosine phosphosulfate reductase; KEGG: mmq:MmarC5_0748 phosphoadenosine phosphosulfate reductase.
     
 0.681
ABR66452.1
Alanine--glyoxylate transaminase; PFAM: aminotransferase class V; KEGG: mmp:MMP0391 aspartate aminotransferase.
  
  
 0.662
ABR65256.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; HAD superfamily (subfamily IA) hydrolase, TIGR02253; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: mmq:MmarC5_0746 HAD superfamily (subfamily IA) hydrolase, TIGR02253.
 
  
 0.654
ABR65857.1
PFAM: Translin; KEGG: mmp:MMP1542 translin related protein.
      
 0.642
Your Current Organism:
Methanococcus maripaludis C7
NCBI taxonomy Id: 426368
Other names: M. maripaludis C7, Methanococcus maripaludis str. C7, Methanococcus maripaludis strain C7
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