STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABR66082.1Transcriptional regulator, LysR family; PFAM: regulatory protein LuxR; regulatory protein LysR; KEGG: mmp:MMP0018 transcriptional regulator, LysR family member. (280 aa)    
Predicted Functional Partners:
ABR66595.1
PFAM: beta-lactamase domain protein; KEGG: mmp:MMP0517 hypothetical protein.
  
  
 0.637
ABR66081.1
PFAM: Radical SAM domain protein; SMART: Elongator protein 3/MiaB/NifB; KEGG: mmp:MMP0017 hypothetical protein.
  
    0.593
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine.
  
  
 0.576
ABR65233.1
PFAM: PRC-barrel domain protein; KEGG: mmp:MMP0916 hypothetical protein.
       0.449
ABR65232.1
KEGG: mmq:MmarC5_0722 nucleotidyl transferase.
       0.448
hel308
DEAD/DEAH box helicase domain protein; DNA-dependent ATPase and 3'-5' DNA helicase that may be involved in repair of stalled replication forks.
       0.434
ABR66522.1
PFAM: Cupin 2 conserved barrel domain protein; KEGG: mac:MA0402 hypothetical protein.
  
  
 0.405
Your Current Organism:
Methanococcus maripaludis C7
NCBI taxonomy Id: 426368
Other names: M. maripaludis C7, Methanococcus maripaludis str. C7, Methanococcus maripaludis strain C7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.