STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ABR66727.1PFAM: Lactate/malate dehydrogenase; KEGG: mmp:MMP0645 malate dehydrogenase, MDHII (NADP+-dependent); Belongs to the LDH/MDH superfamily. (314 aa)    
Predicted Functional Partners:
ABR66726.1
TIGRFAM: cation diffusion facilitator family transporter; PFAM: cation efflux protein; KEGG: mmp:MMP0644 cation efflux protein.
  
    0.990
ABR66195.1
TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; KEGG: mmp:MMP0130 fumarate hydratase.
  
 
 0.989
ABR65863.1
TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; KEGG: mmp:MMP1548 Fe-S type hydro-lyases tartrate/fumarate beta region.
  
 
 0.986
ABR65454.1
PFAM: Malate/L-lactate dehydrogenase; KEGG: mmp:MMP1133 L-sulfolactate dehydrogenase/(S)-hydroxyglutaric acid dehydrogenase.
    
 0.974
ABR66404.1
TIGRFAM: oxaloacetate decarboxylase alpha subunit; PFAM: biotin/lipoyl attachment domain-containing protein; pyruvate carboxyltransferase; Conserved carboxylase region; KEGG: mmp:MMP0340 pyruvate carboxylase subunit B.
    
 0.969
ABR65395.1
PFAM: aminotransferase class I and II; KEGG: mmp:MMP1072 aminotransferase (subgroup I) similar to aromatic aminotransferase.
  
 0.935
gap
TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type II; PFAM: glyceraldehyde 3-phosphate dehydrogenase; dihydrodipicolinate reductase; KEGG: mmp:MMP0325 glyceraldehyde 3-phosphate dehydrogenase.
 
 
 0.933
sucD
succinyl-CoA synthetase, alpha subunit; Succinyl-CoA synthetase functions in the citric acid cycle (TCA), coupling the hydrolysis of succinyl-CoA to the synthesis of either ATP or GTP and thus represents the only step of substrate-level phosphorylation in the TCA. The alpha subunit of the enzyme binds the substrates coenzyme A and phosphate, while succinate binding and nucleotide specificity is provided by the beta subunit.
  
 
 0.925
ABR66405.1
TIGRFAM: acetyl-CoA carboxylase, biotin carboxylase; PFAM: phosphoribosylglycinamide synthetase; Carbamoyl-phosphate synthase L chain ATP-binding; Carbamoyl-phosphate synthetase large chain domain protein; biotin carboxylase domain protein; RimK domain protein ATP-grasp; KEGG: mmp:MMP0341 pyruvate carboxylase subunit A.
    
 0.921
ABR65590.1
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: mmp:MMP1277 fumarate reductase/succinate dehydrogenase, flavoprotein subunit.
 
 
 0.920
Your Current Organism:
Methanococcus maripaludis C7
NCBI taxonomy Id: 426368
Other names: M. maripaludis C7, Methanococcus maripaludis str. C7, Methanococcus maripaludis strain C7
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